Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 RPL35AP22-201ENST00000436855 335 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 MTND6P13-201ENST00000443510 523 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 RPL21P131-201ENST00000497298 483 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 AP004242.1-201ENST00000533701 349 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
COL6A5A8TX70 CFTRP2-201ENST00000634304 199 ntBASIC0.99□□□□□ -2.25
COL6A5A8TX70 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
COL6A5A8TX70 AL159152.1-201ENST00000635019 2587 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
COL6A5A8TX70 LINC01347-201ENST00000417964 355 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.98□□□□□ -2.25
COL6A5A8TX70 GTF2IP12-201ENST00000456547 356 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A5A8TX70 AC010625.1-201ENST00000511296 403 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 OR5AQ1P-201ENST00000527596 927 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 AP005435.4-201ENST00000529514 284 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
COL6A5A8TX70 AC009127.3-201ENST00000570531 403 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 AL356118.1-201ENST00000635272 1078 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
COL6A5A8TX70 AC130650.2-201ENST00000618736 2403 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 Y_RNA.170-201ENST00000363746 110 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC0.98□□□□□ -2.25
COL6A5A8TX70 SNORA2A-201ENST00000383885 135 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 AC090774.1-201ENST00000435925 246 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 RBM43P1-201ENST00000476891 1081 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 AC233266.2-201ENST00000567067 528 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 AL135786.2-201ENST00000608422 615 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 MIR6513-201ENST00000621188 64 ntBASIC0.98□□□□□ -2.25
COL6A5A8TX70 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.98□□□□□ -2.25
COL6A5A8TX70 AP002907.1-201ENST00000606361 1430 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 AC114546.3-201ENST00000623582 1734 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 SNORD48-201ENST00000364953 64 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 MIR1912-201ENST00000410389 80 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 SNRPEP10-201ENST00000420249 274 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 MORF4L1P7-201ENST00000426038 703 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
COL6A5A8TX70 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC0.97□□□□□ -2.25
COL6A5A8TX70 uc_338.14-201ENST00000613162 166 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 AC004808.1-201ENST00000627671 721 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL6A5A8TX70 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL6A5A8TX70 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL6A5A8TX70 RNU6-418P-201ENST00000384035 107 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 RNA5SP25-201ENST00000410815 110 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 AL158823.1-201ENST00000418441 478 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 BLOC1S2P1-201ENST00000428431 301 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 UBE2V1P13-201ENST00000436983 439 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 AL031659.1-201ENST00000447075 539 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 SNRPGP12-201ENST00000449481 213 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 RPS27AP10-201ENST00000496103 208 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 RNU4-60P-201ENST00000517239 135 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 AC091925.1-201ENST00000623204 462 ntBASIC0.97□□□□□ -2.25
COL6A5A8TX70 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.25
COL6A5A8TX70 AC111188.2-201ENST00000529697 1387 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.96□□□□□ -2.26
COL6A5A8TX70 RNF6P1-201ENST00000444889 1784 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A5A8TX70 RNA5SP189-201ENST00000364920 115 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
COL6A5A8TX70 RPL17P12-201ENST00000413391 526 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC019070.1-201ENST00000415008 1024 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.96□□□□□ -2.26
COL6A5A8TX70 RPS6P14-201ENST00000425165 719 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC008850.1-201ENST00000427546 362 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AL353706.1-201ENST00000436728 494 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC135999.1-201ENST00000478962 479 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC007115.1-201ENST00000546853 234 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 Y_RNA.757-201ENST00000578934 114 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 MIR6759-201ENST00000638110 65 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A5A8TX70 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A5A8TX70 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC114973.1-201ENST00000429057 632 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 RPL23AP41-201ENST00000484754 458 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A5A8TX70 AC008083.4-201ENST00000615076 444 ntBASIC0.96□□□□□ -2.26
COL6A5A8TX70 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A5A8TX70 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A5A8TX70 Y_RNA.25-201ENST00000362528 102 ntBASIC0.95□□□□□ -2.26
COL6A5A8TX70 Z75741.2-201ENST00000417272 1167 ntBASIC0.95□□□□□ -2.26
COL6A5A8TX70 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 AP001960.1-201ENST00000506494 658 ntBASIC0.95□□□□□ -2.26
COL6A5A8TX70 CYCSP23-201ENST00000519781 313 ntBASIC0.95□□□□□ -2.26
COL6A5A8TX70 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 MIR4716-201ENST00000579628 84 ntBASIC0.95□□□□□ -2.26
COL6A5A8TX70 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.95□□□□□ -2.26
COL6A5A8TX70 YWHAQP7-201ENST00000603536 658 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms