Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 SNORA60-201ENST00000362396 134 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.307-201ENST00000365022 117 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-444P-201ENST00000383988 108 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-921P-201ENST00000384361 107 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 SSXP10-201ENST00000402595 565 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL606923.1-201ENST00000406616 190 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU2-36P-201ENST00000410361 191 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 MTATP6P16-201ENST00000434543 526 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL118520.1-201ENST00000450770 291 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 ELOCP24-201ENST00000456370 334 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL36AP13-201ENST00000457490 317 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 CEACAMP4-201ENST00000457676 421 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL049714.1-201ENST00000466686 347 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC006511.1-201ENST00000470614 315 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC098591.2-201ENST00000510152 315 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 SNORD27.1-201ENST00000516319 72 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 MIR4458-201ENST00000578872 75 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC017100.2-201ENST00000584628 355 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 BNIP3P25-201ENST00000596023 559 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL139395.1-201ENST00000603662 160 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 ZYXP1-201ENST00000617638 118 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 uc_338.11-201ENST00000619132 160 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL732372.2-225ENST00000642124 456 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 AC004972.1-201ENST00000623934 2209 ntBASIC4.36□□□□□ -1.71
CDK5RAP1Q96SZ6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 MTND5P10-201ENST00000603719 1809 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AL049641.1-201ENST00000441055 1948 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-1115P-201ENST00000362490 106 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 U3.12-201ENST00000364498 214 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP513-201ENST00000364648 118 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-310P-201ENST00000384655 107 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP317-201ENST00000410176 116 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.646-201ENST00000410980 101 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP311-201ENST00000411290 116 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC074085.1-201ENST00000413598 418 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 SKA2P1-201ENST00000425592 390 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RPS6P12-201ENST00000432491 726 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AL031663.1-201ENST00000437445 219 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL23AP89-201ENST00000439324 255 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 TXNP1-201ENST00000441872 371 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 NANOGP10-201ENST00000453325 895 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC133473.1-201ENST00000455173 299 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC068781.1-201ENST00000488231 618 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC055855.1-201ENST00000489563 579 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP315-201ENST00000516340 116 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RN7SKP21-201ENST00000516503 220 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-635P-201ENST00000516651 102 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-566P-201ENST00000516790 107 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNA5SP312-201ENST00000517068 116 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 HMGB1P41-201ENST00000520234 440 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AP005902.1-201ENST00000521358 186 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC090281.1-201ENST00000523019 276 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 MYL12BP1-201ENST00000569826 507 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC022655.2-201ENST00000577280 318 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 MIR3160-1-201ENST00000577972 85 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 CYP2C61P-201ENST00000604072 290 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AL355816.1-201ENST00000607951 118 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC068724.3-201ENST00000625906 87 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AC011266.1-201ENST00000624119 3569 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 TAB3P1-202ENST00000452645 1634 ntBASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK5RAP1Q96SZ6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDK5RAP1Q96SZ6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms