Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-97P-201ENST00000363387 104 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 RNU1-105P-201ENST00000363470 161 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 UBE2V1P2-201ENST00000397758 440 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 ERHP2-201ENST00000402323 299 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AL953862.1-201ENST00000423016 168 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 RPL7L1P10-201ENST00000427790 463 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC007327.1-201ENST00000447461 264 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 WASF1P1-201ENST00000447560 1131 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 SNORA59A-201ENST00000459326 152 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AL049829.1-201ENST00000465411 156 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC021382.1-201ENST00000483523 359 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 RPL37P25-201ENST00000507308 276 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC021146.8-201ENST00000507455 733 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 RNU6-1282P-201ENST00000516735 96 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 MTND3P19-201ENST00000603825 345 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AL136363.1-201ENST00000605349 337 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC004852.3-201ENST00000614131 326 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC034102.8-201ENST00000615146 484 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AL159972.1-201ENST00000625150 448 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.66□□□□□ -1.98
RPRD1AQ96P16 AC011477.1-204ENST00000623416 1325 ntBASIC2.66□□□□□ -1.98
RPRD1AQ96P16 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.65□□□□□ -1.98
RPRD1AQ96P16 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RPRD1AQ96P16 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 RNU1-39P-201ENST00000383897 165 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 RNU6-637P-201ENST00000384050 107 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 RNU6-1176P-201ENST00000390955 107 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MIR1284-201ENST00000408337 120 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 BNIP3P2-201ENST00000441221 577 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 DDX3P2-201ENST00000446138 111 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MEMO1P3-201ENST00000459811 302 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MTND1P16-201ENST00000465177 898 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 UBE2DNL-203ENST00000474922 222 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC126389.1-201ENST00000477436 290 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 FAM172BP-201ENST00000487497 1089 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC008716.1-201ENST00000511084 513 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 RNU4-29P-201ENST00000515943 174 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC087276.1-201ENST00000529659 480 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC243972.3-201ENST00000539655 198 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MIR4446-201ENST00000578505 67 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MIR4672-201ENST00000583126 81 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC107075.1-201ENST00000613695 314 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 MIR6817-201ENST00000615588 66 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 AC116618.1-201ENST00000634617 774 ntBASIC2.65□□□□□ -1.99
RPRD1AQ96P16 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPRD1AQ96P16 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 Y_RNA.311-201ENST00000365068 96 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 SNORD116.1-201ENST00000365628 92 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 SET-203ENST00000372688 801 ntTSL 2 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 RNA5SP354-201ENST00000391247 136 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 TPMTP3-201ENST00000411928 735 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 MTCYBP3-201ENST00000445588 1137 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 CBWD4P-201ENST00000445695 655 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 MTATP6P14-201ENST00000455189 673 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC022447.3-201ENST00000506865 495 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC079395.1-201ENST00000510981 262 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC021451.1-201ENST00000523498 1129 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC010546.1-201ENST00000569391 485 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC009163.5-201ENST00000575421 637 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms