Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC010486.1-201ENST00000511793 424 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AC006499.2-201ENST00000513470 337 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RNU6-714P-201ENST00000516963 103 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RN7SKP40-201ENST00000517211 242 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RNU6-840P-201ENST00000517275 65 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 OR4K7P-201ENST00000580232 945 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 AC005498.1-201ENST00000592125 465 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 VN1R90P-201ENST00000595717 726 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RPL23AP88-201ENST00000605759 454 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AC107294.1-201ENST00000609524 467 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMC1AQ14683 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC1AQ14683 Z99129.2-201ENST00000619967 314 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AC068787.1-201ENST00000623908 691 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AC231657.1-201ENST00000624313 397 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMC1AQ14683 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SMC1AQ14683 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AC062016.1-201ENST00000355719 319 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 RNU6-1078P-201ENST00000364522 103 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC1AQ14683 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.15□□□□□ -1.91
SMC1AQ14683 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC1AQ14683 RPS20P5-201ENST00000434808 360 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AL049734.2-201ENST00000441066 616 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC1AQ14683 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC008571.1-201ENST00000467232 300 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC079395.1-201ENST00000510981 262 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AC109445.1-201ENST00000512356 383 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.15□□□□□ -1.91
SMC1AQ14683 RNU6-826P-201ENST00000516827 104 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.15□□□□□ -1.91
SMC1AQ14683 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC1AQ14683 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.15□□□□□ -1.91
SMC1AQ14683 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AL512347.1-201ENST00000566420 503 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AL355877.2-201ENST00000603670 358 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AP000787.2-201ENST00000604432 568 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AC013412.1-201ENST00000610687 192 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AL445264.1-201ENST00000621719 171 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC1AQ14683 AP003399.1-201ENST00000637534 361 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 AL079343.1-201ENST00000572358 1771 ntBASIC3.15□□□□□ -1.91
SMC1AQ14683 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMC1AQ14683 Y_RNA.311-201ENST00000365068 96 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC1AQ14683 RNU6-952P-201ENST00000391164 108 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 TIMM9P2-201ENST00000419324 266 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC1AQ14683 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC084290.1-201ENST00000434995 374 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 Z82210.1-201ENST00000440037 231 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 FGF7P5-201ENST00000441829 291 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 CBWD4P-201ENST00000445695 655 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 SNORD121B-201ENST00000458838 81 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC097493.1-201ENST00000463958 372 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC1AQ14683 RN7SL432P-201ENST00000484057 298 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 RPS15AP34-201ENST00000487776 387 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC091951.3-201ENST00000504093 246 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC020699.1-201ENST00000505161 445 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 RNU6-311P-201ENST00000516224 102 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC1AQ14683 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC1AQ14683 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC1AQ14683 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC1AQ14683 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC1AQ14683 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.14□□□□□ -1.91
SMC1AQ14683 AL355836.1-201ENST00000555951 870 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMC1AQ14683 AC022662.1-201ENST00000580252 331 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 NRBF2P5-201ENST00000603087 788 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC080013.3-201ENST00000606839 578 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC093838.1-201ENST00000613014 469 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC1AQ14683 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC1AQ14683 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.14□□□□□ -1.91
SMC1AQ14683 CR848007.1-201ENST00000442354 1699 ntBASIC3.14□□□□□ -1.91
SMC1AQ14683 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms