Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC108078.2-201ENST00000510750 236 ntBASIC3.64□□□□□ -1.83
RAE1P78406 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.64□□□□□ -1.83
RAE1P78406 OR5B19P-201ENST00000531766 928 ntBASIC3.64□□□□□ -1.83
RAE1P78406 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.64□□□□□ -1.83
RAE1P78406 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.64□□□□□ -1.83
RAE1P78406 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.64□□□□□ -1.83
RAE1P78406 AL138976.2-201ENST00000563989 694 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AC120057.2-201ENST00000571520 271 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.64□□□□□ -1.83
RAE1P78406 AC020914.4-201ENST00000597690 277 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RNA5SP196-201ENST00000625967 102 ntBASIC3.64□□□□□ -1.83
RAE1P78406 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
RAE1P78406 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.64□□□□□ -1.83
RAE1P78406 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.64□□□□□ -1.83
RAE1P78406 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.64□□□□□ -1.83
RAE1P78406 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RAE1P78406 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.63□□□□□ -1.83
RAE1P78406 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 AL354685.2-201ENST00000448218 1447 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC103710.2-202ENST00000641454 2853 ntBASIC3.63□□□□□ -1.83
RAE1P78406 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 SPRR2C-201ENST00000290702 219 ntBASIC3.63□□□□□ -1.83
RAE1P78406 NACAP2-201ENST00000318548 624 ntBASIC3.63□□□□□ -1.83
RAE1P78406 CBX3P1-201ENST00000325243 554 ntBASIC3.63□□□□□ -1.83
RAE1P78406 RNU6-552P-201ENST00000362869 119 ntBASIC3.63□□□□□ -1.83
RAE1P78406 Y_RNA.72-201ENST00000362894 103 ntBASIC3.63□□□□□ -1.83
RAE1P78406 SNORA62-201ENST00000365493 153 ntBASIC3.63□□□□□ -1.83
RAE1P78406 RNU6-946P-201ENST00000383878 107 ntBASIC3.63□□□□□ -1.83
RAE1P78406 U1.1-201ENST00000384101 164 ntBASIC3.63□□□□□ -1.83
RAE1P78406 SOD2P1-201ENST00000396543 562 ntBASIC3.63□□□□□ -1.83
RAE1P78406 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.63□□□□□ -1.83
RAE1P78406 RNU2-29P-201ENST00000410423 189 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC018630.2-202ENST00000422992 927 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.63□□□□□ -1.83
RAE1P78406 C4BPAP2-201ENST00000428434 478 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC098614.3-201ENST00000438957 440 ntBASIC3.63□□□□□ -1.83
RAE1P78406 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.63□□□□□ -1.83
RAE1P78406 AC108860.1-201ENST00000484521 383 ntBASIC3.63□□□□□ -1.83
RAE1P78406 RPL23AP55-201ENST00000498163 452 ntBASIC3.63□□□□□ -1.83
RAE1P78406 MTCO2P30-201ENST00000503662 364 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC008549.1-201ENST00000512900 643 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC114781.4-201ENST00000513707 639 ntBASIC3.63□□□□□ -1.83
RAE1P78406 SCARNA14-201ENST00000516903 136 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AP006587.4-201ENST00000526053 529 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC109635.4-202ENST00000531666 412 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.63□□□□□ -1.83
RAE1P78406 AC067852.3-201ENST00000589177 561 ntBASIC3.63□□□□□ -1.83
RAE1P78406 BDH2P1-201ENST00000602288 736 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC023043.4-201ENST00000612081 449 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.63□□□□□ -1.83
RAE1P78406 AC010338.1-201ENST00000621823 717 ntBASIC3.63□□□□□ -1.83
RAE1P78406 C2orf27A-204ENST00000623058 969 ntBASIC3.63□□□□□ -1.83
RAE1P78406 AC011155.2-201ENST00000623202 216 ntBASIC3.63□□□□□ -1.83
RAE1P78406 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.63□□□□□ -1.83
RAE1P78406 U6.114-201ENST00000636407 96 ntBASIC3.63□□□□□ -1.83
RAE1P78406 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RAE1P78406 AP001350.1-201ENST00000601906 1524 ntBASIC3.63□□□□□ -1.83
RAE1P78406 OR4G1P-203ENST00000641984 1631 ntBASIC3.62□□□□□ -1.83
RAE1P78406 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RAE1P78406 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.62□□□□□ -1.83
RAE1P78406 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.62□□□□□ -1.83
RAE1P78406 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
RAE1P78406 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RAE1P78406 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.62□□□□□ -1.83
RAE1P78406 API5P2-201ENST00000397055 1498 ntBASIC3.62□□□□□ -1.83
RAE1P78406 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RAE1P78406 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RAE1P78406 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RAE1P78406 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RAE1P78406 Y_RNA.86-201ENST00000363020 111 ntBASIC3.62□□□□□ -1.83
RAE1P78406 RNA5SP443-201ENST00000363083 132 ntBASIC3.62□□□□□ -1.83
RAE1P78406 RNA5SP97-201ENST00000365006 84 ntBASIC3.62□□□□□ -1.83
RAE1P78406 SNORD115-7-201ENST00000365306 82 ntBASIC3.62□□□□□ -1.83
RAE1P78406 RNA5SP283-201ENST00000365604 119 ntBASIC3.62□□□□□ -1.83
RAE1P78406 RNU6-701P-201ENST00000384059 107 ntBASIC3.62□□□□□ -1.83
RAE1P78406 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RAE1P78406 RNU6-903P-201ENST00000391270 109 ntBASIC3.62□□□□□ -1.83
RAE1P78406 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
RAE1P78406 AC114491.1-201ENST00000416095 246 ntBASIC3.62□□□□□ -1.83
RAE1P78406 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.62□□□□□ -1.83
RAE1P78406 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.62□□□□□ -1.83
RAE1P78406 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.62□□□□□ -1.83
RAE1P78406 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.62□□□□□ -1.83
RAE1P78406 AL513185.2-201ENST00000425543 193 ntBASIC3.62□□□□□ -1.83
RAE1P78406 RSL24D1P6-201ENST00000426934 401 ntBASIC3.62□□□□□ -1.83
RAE1P78406 AC008850.1-201ENST00000427546 362 ntBASIC3.62□□□□□ -1.83
RAE1P78406 SRIP2-201ENST00000428470 166 ntBASIC3.62□□□□□ -1.83
RAE1P78406 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.62□□□□□ -1.83
RAE1P78406 USP9YP8-201ENST00000441913 500 ntBASIC3.62□□□□□ -1.83
RAE1P78406 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.62□□□□□ -1.83
RAE1P78406 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.62□□□□□ -1.83
RAE1P78406 AL162395.1-201ENST00000457882 422 ntBASIC3.62□□□□□ -1.83
RAE1P78406 AP000852.1-201ENST00000472460 573 ntBASIC3.62□□□□□ -1.83
RAE1P78406 HSPE1P6-201ENST00000479457 291 ntBASIC3.62□□□□□ -1.83
RAE1P78406 VN1R105P-201ENST00000486595 910 ntBASIC3.62□□□□□ -1.83
RAE1P78406 AC098591.2-201ENST00000510152 315 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms