Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD9O15198 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD9O15198 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD9O15198 RNA5SP119-201ENST00000362715 117 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 SNORA73.2-201ENST00000364946 201 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SMAD9O15198 RNU2-36P-201ENST00000410361 191 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 MTCO3P41-201ENST00000414801 328 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AL035423.1-201ENST00000420331 213 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD9O15198 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.27□□□□□ -1.89
SMAD9O15198 USP9YP14-201ENST00000430663 563 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 GAPDHP27-201ENST00000447427 1020 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AL136380.1-201ENST00000447970 162 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.27□□□□□ -1.89
SMAD9O15198 PRSS3P4-201ENST00000453323 162 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD9O15198 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD9O15198 RBM43P1-201ENST00000476891 1081 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.27□□□□□ -1.89
SMAD9O15198 AC082651.2-201ENST00000496833 166 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD9O15198 Y_RNA.655-201ENST00000515919 96 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 RNU1-95P-201ENST00000516357 160 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 SCARNA15.2-201ENST00000516409 127 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 RNU6-1256P-201ENST00000516539 103 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 RNU1-128P-201ENST00000516704 160 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 RNU6-430P-201ENST00000517078 107 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC026403.1-201ENST00000518938 295 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD9O15198 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD9O15198 AC004223.2-201ENST00000590309 544 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC245014.2-201ENST00000603689 287 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC091805.2-201ENST00000603848 235 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC246785.4-201ENST00000605374 287 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 MIR98-201ENST00000606724 119 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 AC019176.2-201ENST00000611579 315 ntBASIC3.27□□□□□ -1.89
SMAD9O15198 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD9O15198 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD9O15198 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
SMAD9O15198 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 SNORD56.2-201ENST00000363242 71 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 RNU6-511P-201ENST00000363496 107 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 SNORA5A-201ENST00000384111 134 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 RNU2-16P-201ENST00000410712 136 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 ATP5A1P2-201ENST00000412323 255 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD9O15198 AC245054.1-201ENST00000420944 258 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 NDUFB4P7-201ENST00000423198 363 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 TRIAP1P1-201ENST00000427062 225 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AL590383.1-201ENST00000428602 75 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD9O15198 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD9O15198 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD9O15198 RPS3AP46-201ENST00000448352 682 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 MTCO3P20-201ENST00000454926 688 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AL359385.1-201ENST00000456509 365 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD9O15198 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.26□□□□□ -1.89
SMAD9O15198 RNU6-1231P-201ENST00000517185 103 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 DUXAP2-201ENST00000519198 589 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AC022616.3-201ENST00000523940 148 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.26□□□□□ -1.89
SMAD9O15198 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD9O15198 AC087883.1-201ENST00000551882 391 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.26□□□□□ -1.89
SMAD9O15198 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD9O15198 AL845331.3-202ENST00000562856 261 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
SMAD9O15198 AC002545.1-201ENST00000592511 181 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AL161729.4-201ENST00000604650 476 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AC009570.1-201ENST00000609599 745 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.26□□□□□ -1.89
SMAD9O15198 Z99129.1-201ENST00000612510 255 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD9O15198 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD9O15198 FRG1KP-201ENST00000623592 341 ntBASIC3.26□□□□□ -1.89
SMAD9O15198 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.26□□□□□ -1.89
SMAD9O15198 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD9O15198 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
SMAD9O15198 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD9O15198 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.25□□□□□ -1.89
SMAD9O15198 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SMAD9O15198 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 OR5J1P-201ENST00000313544 939 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 SNORD116-4-201ENST00000384733 96 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 RN7SKP53-201ENST00000411337 315 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.25□□□□□ -1.89
SMAD9O15198 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.25□□□□□ -1.89
SMAD9O15198 RPL30P2-201ENST00000414021 291 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC093578.1-201ENST00000415219 368 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms