Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SLC28A1O00337 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SLC28A1O00337 MTCYBP39-201ENST00000437562 491 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC093392.2-201ENST00000450682 337 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 PRSS3P4-201ENST00000453323 162 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC108059.3-201ENST00000456388 214 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 RN7SL601P-201ENST00000471221 293 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AC010631.1-201ENST00000474150 156 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC28A1O00337 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC007115.1-201ENST00000546853 234 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC093012.1-202ENST00000549403 582 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AL157394.1-201ENST00000562983 1224 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AC078899.3-201ENST00000599065 212 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AC012119.1-201ENST00000603184 222 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AL136363.1-201ENST00000605349 337 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 OR10AB1P-201ENST00000609613 938 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AL020991.1-201ENST00000612314 373 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AC004852.3-201ENST00000614131 326 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 MIR7112-201ENST00000616126 65 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC28A1O00337 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.85□□□□□ -1.95
SLC28A1O00337 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC28A1O00337 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SLC28A1O00337 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SLC28A1O00337 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SLC28A1O00337 Y_RNA.97-201ENST00000363094 102 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 RNU6-217P-201ENST00000384164 104 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 RNU6-278P-201ENST00000390945 109 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 RN7SKP220-201ENST00000410611 288 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SLC28A1O00337 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AL139281.1-201ENST00000422120 335 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 ZNF863P-201ENST00000426746 417 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AL512649.1-201ENST00000428997 581 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AC005094.1-201ENST00000440420 368 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 MTND5P2-201ENST00000442927 1142 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 COX6CP2-201ENST00000444980 225 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC117440.1-201ENST00000474107 571 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 RAC1P5-201ENST00000512182 576 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC28A1O00337 MTND5P13-201ENST00000513046 1079 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC28A1O00337 DEFB108A-201ENST00000530110 222 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC107016.2-201ENST00000547968 190 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC28A1O00337 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC28A1O00337 U73023.1-201ENST00000603134 700 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AL355472.4-201ENST00000610233 626 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC28A1O00337 AC084757.4-201ENST00000616350 526 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 SNHG22-203ENST00000617833 660 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 AC010338.1-201ENST00000621823 717 ntBASIC2.84□□□□□ -1.95
SLC28A1O00337 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.84□□□□□ -1.96
SLC28A1O00337 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SLC28A1O00337 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SLC28A1O00337 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC28A1O00337 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC28A1O00337 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC28A1O00337 RNU1-35P-201ENST00000362782 153 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 SNORA26.7-201ENST00000391288 122 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC078974.1-201ENST00000411597 223 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 RPL17P12-201ENST00000413391 526 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AL593851.1-201ENST00000426171 157 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 SETP8-201ENST00000435341 628 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC28A1O00337 RPL37P21-201ENST00000435890 276 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC020550.1-201ENST00000447385 163 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC28A1O00337 MTCO1P42-201ENST00000457379 726 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms