Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC010099.1-201ENST00000455434 375 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 snoU109.4-201ENST00000458953 143 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 RPL7P49-201ENST00000471402 708 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC004263.1-201ENST00000479327 332 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 RPS3AP22-201ENST00000488297 769 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 RN7SL504P-201ENST00000494496 287 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC109464.2-201ENST00000510242 943 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC074250.1-201ENST00000511117 192 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC009812.2-201ENST00000517657 457 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AP002404.1-201ENST00000532005 451 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 CR383656.7-201ENST00000548164 174 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 CCNG2P1-201ENST00000549521 1000 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 HMGB1P14-201ENST00000557424 591 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC136618.2-201ENST00000575091 400 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 MIR3605-201ENST00000583214 100 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC015871.2-201ENST00000603605 948 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC055876.5-201ENST00000605667 259 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC069234.5-201ENST00000611056 416 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL590099.1-201ENST00000615276 138 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL031667.3-201ENST00000620124 655 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC012150.2-201ENST00000621300 544 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL356585.4-201ENST00000623078 1229 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL356266.1-201ENST00000623311 483 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC079597.1-201ENST00000624306 508 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC097714.1-201ENST00000511272 1647 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC00477Q96M19 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LINC00477Q96M19 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC00477Q96M19 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LINC00477Q96M19 MIR26A1-201ENST00000362205 77 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 RNU6-28P-201ENST00000362378 107 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 RNA5SP88-201ENST00000365560 109 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 RNU6-1207P-201ENST00000384343 107 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 TAS2R15P-201ENST00000390674 928 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AF228730.1-201ENST00000397972 663 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL512633.1-201ENST00000399931 655 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL139095.1-201ENST00000404326 391 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 CCNG1P1-201ENST00000406783 885 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LINC00477Q96M19 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 SDCBPP1-201ENST00000440192 890 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 RAC1P7-201ENST00000445367 377 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 ATG12P2-201ENST00000456830 416 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 BX510359.1-201ENST00000456973 237 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC083906.5-201ENST00000503722 328 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC008885.1-201ENST00000514930 301 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 SCGB1D5P-201ENST00000515134 247 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 SNORA31.15-201ENST00000516771 132 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 SNORA31.21-201ENST00000517180 77 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC087276.1-201ENST00000529659 480 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC013828.2-201ENST00000532487 235 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC145350.1-201ENST00000567426 208 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC023043.3-201ENST00000593113 385 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AP000811.1-201ENST00000603803 651 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL022099.1-201ENST00000604551 712 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC107214.2-201ENST00000608204 634 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AC034102.8-201ENST00000615146 484 ntBASIC2.14□□□□□ -2.07
LINC00477Q96M19 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
LINC00477Q96M19 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
LINC00477Q96M19 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00477Q96M19 DDX43P2-201ENST00000604753 1354 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL356131.1-201ENST00000405826 414 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 RPS3AP24-201ENST00000407896 734 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms