Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC119751.3-201ENST00000399720 670 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL512633.1-201ENST00000399931 655 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL138880.1-201ENST00000405824 642 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 MIR1261-201ENST00000408659 82 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL135786.1-201ENST00000415892 214 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 RPLP0P7-201ENST00000416050 667 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC007742.1-201ENST00000425789 329 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 RPS25P9-201ENST00000435591 252 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 ELOCP26-201ENST00000436067 329 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL591719.1-201ENST00000444669 744 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 UBL5P3-201ENST00000475112 231 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC090453.1-201ENST00000495560 436 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC147055.4-201ENST00000504399 745 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC105185.1-201ENST00000518705 535 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 OR5AK1P-201ENST00000524837 922 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 MIR4446-201ENST00000578505 67 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 BNIP3P24-201ENST00000593398 557 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL592221.1-201ENST00000605266 382 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL133507.1-201ENST00000605269 557 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL158042.1-201ENST00000605338 460 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC112220.3-201ENST00000605502 502 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC087241.4-201ENST00000612441 480 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL359757.2-201ENST00000624309 274 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC017037.3-201ENST00000625016 472 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AC091925.2-201ENST00000625059 256 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 GDI2P1-201ENST00000429312 1336 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-50P-201ENST00000362356 103 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-952P-201ENST00000391164 108 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 MIR1284-201ENST00000408337 120 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTCYBP38-201ENST00000417160 1123 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 PSMA6P3-201ENST00000428242 164 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 EEF1E1P1-201ENST00000446998 430 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC005297.2-201ENST00000450430 606 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU7-136P-201ENST00000458819 69 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTND2P14-201ENST00000482139 351 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL024509.2-201ENST00000493462 493 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 YWHAEP4-201ENST00000505390 198 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 XKRY-201ENST00000510392 1100 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 UBTFL10-201ENST00000528532 562 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 OR7K1P-201ENST00000546439 926 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL354943.1-201ENST00000572103 781 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC087683.2-201ENST00000611384 326 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC243773.3-201ENST00000613270 256 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP002782.1-201ENST00000623107 614 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC040168.1-201ENST00000623594 991 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTND2P41-201ENST00000637599 773 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL390862.1-201ENST00000635467 1469 ntBASIC2.52□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC091564.4-201ENST00000533934 2194 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 OR4G11P-202ENST00000642116 1414 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-931P-201ENST00000363850 107 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORA14A-201ENST00000364773 135 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-1027P-201ENST00000383998 107 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-1181P-201ENST00000384191 106 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORA36C-201ENST00000384289 132 ntBASIC2.51□□□□□ -2.01
TMX2-CTNND1H3BSU7 MIR27B-201ENST00000385129 97 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms