Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 BNIP3P2-201ENST00000441221 577 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AL590664.1-201ENST00000448065 339 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 RPS7P7-201ENST00000463499 571 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC023598.1-201ENST00000472521 361 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC006445.2-201ENST00000510061 472 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 MTND3P5-201ENST00000512798 333 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 RNU6-1092P-201ENST00000516955 87 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 RNU6-430P-201ENST00000517078 107 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 RPS3AP4-201ENST00000555161 764 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 TGIF1P1-201ENST00000558095 802 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC005951.1-201ENST00000576706 485 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 MIR4474-201ENST00000579189 78 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 NRBF2P1-201ENST00000587407 859 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC067852.3-201ENST00000589177 561 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AL161729.4-201ENST00000604650 476 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AL136363.1-201ENST00000605349 337 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC103591.3-201ENST00000608684 209 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 AL589743.7-201ENST00000612637 233 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 MIR6076-201ENST00000617521 113 ntBASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHMP1AQ9HD42 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC058791.1-201ENST00000608412 3198 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RNU1-32P-201ENST00000363937 159 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RNU6-188P-201ENST00000364207 107 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RNU4-75P-201ENST00000364621 146 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 SMIM11P1-201ENST00000369586 178 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RNU6-741P-201ENST00000383889 107 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 SNORA1.3-201ENST00000384676 136 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RPL21P17-201ENST00000397467 475 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RPL7P46-201ENST00000425129 740 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC006989.1-201ENST00000427212 131 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 OR2AS1P-201ENST00000427827 319 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 DPPA2P1-201ENST00000428060 556 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC007919.1-201ENST00000429380 217 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RPS24P1-201ENST00000438550 371 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC079448.1-201ENST00000449377 373 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 MRPS31P2-201ENST00000451581 518 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC010618.1-201ENST00000469924 477 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 KC877373.1-201ENST00000479066 408 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RPS4XP22-201ENST00000480755 780 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RN7SL432P-201ENST00000484057 298 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 CDH12P4-201ENST00000517835 295 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 CDH12P3-201ENST00000517935 295 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 CDH12P1-201ENST00000518435 295 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 NDUFB9P3-201ENST00000521269 501 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 TRAV28-201ENST00000557548 323 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 MTND1P15-201ENST00000579262 949 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 GLUD1P4-201ENST00000590914 418 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC079089.3-201ENST00000603094 673 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AL606490.9-201ENST00000603331 271 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC007363.1-201ENST00000604736 620 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AP002360.4-201ENST00000606980 481 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC099842.1-201ENST00000619919 596 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 OR5H6-203ENST00000642105 978 ntBASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CHMP1AQ9HD42 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL049641.1-201ENST00000441055 1948 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms