Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 HSPE1P7-201ENST00000604681 321 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AC097504.2-201ENST00000608088 454 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AL445264.1-201ENST00000621719 171 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 CRYM-AS1-204ENST00000637983 556 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 PABPC1P9-201ENST00000426076 1612 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AL022578.1-201ENST00000439330 1433 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 MTND4P9-201ENST00000507819 1346 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 SNORD116.1-201ENST00000365628 92 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 RNU6-1122P-201ENST00000384449 107 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AL136310.1-201ENST00000404926 654 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AL162578.1-201ENST00000406202 378 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 RPS3AP24-201ENST00000407896 734 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 MTCO2P5-201ENST00000422621 426 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 MTCO2P17-201ENST00000424336 677 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 SDCBPP1-201ENST00000440192 890 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 EXOSC3P1-201ENST00000448649 500 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 RNA5SP320-201ENST00000516263 124 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 CASP1P1-201ENST00000526345 212 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 MYL12BP1-201ENST00000569826 507 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC011471.1-201ENST00000585766 187 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC105224.1-201ENST00000587055 421 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AL160237.3-201ENST00000604114 1013 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 TUG1_1.1-201ENST00000610654 145 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC107075.1-201ENST00000613695 314 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AL450472.3-201ENST00000615578 367 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 U4.3-201ENST00000621047 82 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AP003485.2-201ENST00000623636 610 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 AC110079.1-202ENST00000635213 138 ntBASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC65Q8IXS2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 RNU6-413P-201ENST00000384115 107 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 MIR144-201ENST00000384886 86 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 RPL23AP29-201ENST00000397284 453 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL031679.1-201ENST00000400616 525 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 MTATP6P20-201ENST00000414147 562 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 RPS3AP37-201ENST00000419176 745 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL139421.1-201ENST00000423010 169 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC090774.1-201ENST00000435925 246 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 NDUFB4P6-201ENST00000436819 366 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC104389.3-201ENST00000445629 235 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 MTCO2P25-201ENST00000447065 681 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 MTCO3P11-201ENST00000455103 774 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 MTND2P39-201ENST00000457230 764 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 snoU109.3-201ENST00000459477 145 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC104164.3-201ENST00000467363 1258 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 RPL23AP45-201ENST00000476406 468 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC022483.1-201ENST00000514020 567 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC021451.1-201ENST00000523498 1129 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 DEFB131D-201ENST00000526803 184 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 RPL23AP84-201ENST00000571193 464 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL357080.1-201ENST00000617394 239 ntBASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC65Q8IXS2 AL079343.1-201ENST00000572358 1771 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 TIMM9P2-201ENST00000419324 266 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 ARPC3P5-201ENST00000448802 534 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC011753.1-201ENST00000451001 220 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 BX322784.1-201ENST00000455793 1077 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC097493.1-201ENST00000463958 372 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC133134.1-201ENST00000466800 359 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 RPL31P60-201ENST00000478450 367 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC090136.1-201ENST00000520009 240 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 TMF1P1-201ENST00000576058 373 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC103810.1-201ENST00000579873 453 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AP000254.1-201ENST00000609934 520 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC104237.2-201ENST00000612456 443 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AC002550.2-201ENST00000621246 394 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms