Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40AO75400 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40AO75400 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40AO75400 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40AO75400 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 RNA5SP191-201ENST00000362585 102 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 RNU5A-1-201ENST00000362698 116 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 RNU4-14P-201ENST00000410858 122 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 RNU6-370P-201ENST00000411008 104 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF40AO75400 RPLP0P7-201ENST00000416050 667 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 AC244098.2-201ENST00000422068 99 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
PRPF40AO75400 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40AO75400 OR1H1P-201ENST00000448731 937 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40AO75400 SNORD108-201ENST00000459332 71 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 IGLV2-34-201ENST00000490007 283 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 RPS27P27-201ENST00000498779 255 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF40AO75400 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40AO75400 AC090115.3-201ENST00000553218 849 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 FAM60BP-201ENST00000578364 658 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 MIR3667-201ENST00000581025 74 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 AC023043.2-201ENST00000589678 1026 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 AL160290.3-201ENST00000604869 165 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 AL391358.1-201ENST00000605342 190 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 MIR6748-201ENST00000610433 71 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 MIR6820-201ENST00000611508 62 ntBASIC5.22□□□□□ -1.57
PRPF40AO75400 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40AO75400 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40AO75400 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40AO75400 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PRPF40AO75400 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40AO75400 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.21□□□□□ -1.57
PRPF40AO75400 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
PRPF40AO75400 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.21□□□□□ -1.57
PRPF40AO75400 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PRPF40AO75400 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.21□□□□□ -1.57
PRPF40AO75400 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF40AO75400 RPL32P3-201ENST00000359025 275 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MIR448-201ENST00000362131 111 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 SNORD116-29-201ENST00000384516 83 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 RNU6-14P-201ENST00000384630 106 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MIR93-201ENST00000385024 80 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MTCYBP4-201ENST00000401524 249 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MIR548P-201ENST00000408336 84 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 RNA5SP113-201ENST00000410486 84 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MTCO1P39-201ENST00000426148 480 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 PRDX3P3-201ENST00000447765 522 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF40AO75400 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF40AO75400 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF40AO75400 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF40AO75400 HMGN1P10-201ENST00000474557 553 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 AC027575.1-201ENST00000481064 460 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MTND5P5-201ENST00000503764 376 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 SCARNA22-201ENST00000503991 125 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF40AO75400 RNU2-69P-201ENST00000516061 100 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 RNA5SP154-201ENST00000516193 111 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 SNORA31.20-201ENST00000517111 133 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 AP005639.2-201ENST00000527592 928 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF40AO75400 AC069240.1-201ENST00000548774 375 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF40AO75400 AC105129.1-201ENST00000560250 297 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 CYP4A43P-201ENST00000568156 121 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 AL627309.6-201ENST00000606857 840 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF40AO75400 BMS1P21-201ENST00000634565 365 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 AC008013.2-202ENST00000637965 364 ntBASIC5.21□□□□□ -1.58
PRPF40AO75400 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF40AO75400 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF40AO75400 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 Y_RNA.128-201ENST00000363391 112 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 Y_RNA.212-201ENST00000364177 102 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 SNORA36C-201ENST00000384289 132 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 AL121834.1-202ENST00000404494 277 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 AC140479.3-201ENST00000418944 1126 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AL160275.3-201ENST00000423876 471 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms