Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.67□□□□□ -2.14
SDCBPO00560 RAC1P8-201ENST00000427086 527 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.67□□□□□ -2.14
SDCBPO00560 UBE2FP3-201ENST00000436366 524 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.67□□□□□ -2.14
SDCBPO00560 RPL7P36-201ENST00000444633 681 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC096638.1-201ENST00000444678 216 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.67□□□□□ -2.14
SDCBPO00560 AL139109.1-201ENST00000455491 297 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 GTF2IP12-201ENST00000456547 356 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC087588.1-201ENST00000462203 316 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AL049714.1-201ENST00000466686 347 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC104164.3-201ENST00000467363 1258 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC078857.1-201ENST00000469870 667 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.67□□□□□ -2.14
SDCBPO00560 AC119751.5-201ENST00000514077 770 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC022784.5-201ENST00000522241 437 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.67□□□□□ -2.14
SDCBPO00560 ATP5F1P5-201ENST00000526403 760 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SDCBPO00560 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.67□□□□□ -2.14
SDCBPO00560 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.67□□□□□ -2.14
SDCBPO00560 ANP32BP3-201ENST00000559213 706 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.67□□□□□ -2.14
SDCBPO00560 OR4K8P-201ENST00000578842 1048 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.67□□□□□ -2.14
SDCBPO00560 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.67□□□□□ -2.14
SDCBPO00560 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.67□□□□□ -2.14
SDCBPO00560 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC103710.4-201ENST00000609301 899 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AL590099.1-201ENST00000615276 138 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC090132.2-201ENST00000615881 347 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC104307.1-201ENST00000616142 196 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC006213.4-201ENST00000616184 634 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 uc_338.20-201ENST00000621563 178 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC064859.1-201ENST00000624741 174 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AC010149.2-201ENST00000637608 315 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 MTND4P35-201ENST00000604257 1375 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 KPNA2P1-201ENST00000458289 1591 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
SDCBPO00560 AC009902.3-201ENST00000606235 2172 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SDCBPO00560 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.66□□□□□ -2.14
SDCBPO00560 AL355497.1-201ENST00000406262 551 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RNU6-575P-201ENST00000411326 105 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 DPH3P2-201ENST00000422618 250 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.66□□□□□ -2.14
SDCBPO00560 AL358075.3-201ENST00000426289 226 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.66□□□□□ -2.14
SDCBPO00560 AL512661.1-201ENST00000434586 1253 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RPL26P6-201ENST00000440913 438 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC009237.8-201ENST00000445492 379 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 COX6CP12-201ENST00000446748 202 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RNU6-775P-201ENST00000459318 96 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RPL9P6-201ENST00000492764 598 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RPL30P5-201ENST00000494923 336 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 MTCO2P9-201ENST00000503214 694 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RNU6-1102P-201ENST00000516149 96 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 IGKV3-31-201ENST00000523109 329 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 ARL2BPP5-201ENST00000523141 481 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 FAM92A1P1-201ENST00000528023 890 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 SETP7-201ENST00000552169 453 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 MIR5089-201ENST00000580047 84 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 AC015688.2-201ENST00000584523 262 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC105224.1-201ENST00000587055 421 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 AC013444.2-201ENST00000603317 787 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AP001521.1-201ENST00000609150 300 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 OR10AB1P-201ENST00000609613 938 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SDCBPO00560 AC004852.3-201ENST00000614131 326 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.66□□□□□ -2.14
SDCBPO00560 AC090772.4-201ENST00000623599 362 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 MIR219B-201ENST00000637023 88 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 MIR7515-201ENST00000637837 67 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 OR5H6-203ENST00000642105 978 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SDCBPO00560 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SDCBPO00560 GDI2P1-201ENST00000429312 1336 ntBASIC1.66□□□□□ -2.14
SDCBPO00560 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
SDCBPO00560 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
SDCBPO00560 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SDCBPO00560 RNU6-792P-201ENST00000363490 107 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 SNORA67.3-201ENST00000384366 140 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 Y_RNA.500-201ENST00000384466 111 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 MIR325-201ENST00000385260 98 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AL023284.1-201ENST00000403956 276 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.65□□□□□ -2.15
SDCBPO00560 SFR1P2-201ENST00000421841 730 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms