Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 MTCYBP34-201ENST00000439552 670 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC026410.2-201ENST00000460281 156 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 RN7SL297P-201ENST00000483161 293 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC021146.8-201ENST00000507455 733 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 AP003122.3-201ENST00000526316 255 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC005832.3-201ENST00000537929 631 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 ELOCP31-201ENST00000540463 467 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC027807.1-201ENST00000559921 996 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCB1Q12824 MIR4298-201ENST00000584380 73 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC009570.1-201ENST00000609599 745 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCB1Q12824 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCB1Q12824 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCB1Q12824 Y_RNA.548-201ENST00000384656 105 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL136310.1-201ENST00000404926 654 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL590084.1-201ENST00000407885 387 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL513477.1-202ENST00000417061 214 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC007742.1-201ENST00000425789 329 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 EZH2P1-201ENST00000431167 291 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 MTND4LP10-201ENST00000435146 291 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 MTCYBP45-201ENST00000435243 565 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 ELOCP26-201ENST00000436067 329 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC092427.1-201ENST00000439177 601 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 RPL32P28-201ENST00000443577 397 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 MTCYBP11-201ENST00000447254 1109 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL589880.1-201ENST00000448271 287 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL031313.1-201ENST00000448435 256 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 RPL18AP17-201ENST00000455326 198 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 RPL37P25-201ENST00000507308 276 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 SNORA31.8-201ENST00000516327 108 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 OR5BN1P-201ENST00000532955 829 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 MIR4509-3-201ENST00000578671 94 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 MIR4509-2-201ENST00000583920 94 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 MIR4509-1-201ENST00000618224 94 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCB1Q12824 CDR1-202ENST00000625883 1485 ntBASIC2.63□□□□□ -1.99
SMARCB1Q12824 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SMARCB1Q12824 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 SNORA25.6-201ENST00000364121 118 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 RNU6-343P-201ENST00000364709 104 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 MTATP6P20-201ENST00000414147 562 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 NANOGP5-201ENST00000424456 877 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 MTND2P5-201ENST00000432656 1006 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 EEF1A1P39-201ENST00000440791 250 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 MTND2P20-201ENST00000440805 661 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 CACYBPP2-201ENST00000453625 678 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 snoU109.4-201ENST00000458953 143 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC005410.1-202ENST00000460347 485 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC006499.2-201ENST00000513470 337 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 OR5AK1P-201ENST00000524837 922 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC123904.3-201ENST00000547218 814 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMARCB1Q12824 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 MIR4637-201ENST00000582405 84 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC245884.10-201ENST00000597355 337 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC079089.3-201ENST00000603094 673 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 DUXAP3-201ENST00000603616 594 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC106791.2-201ENST00000604680 391 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC106052.1-201ENST00000608029 497 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 BX664608.1-201ENST00000610519 487 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC025588.4-201ENST00000615802 908 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 MIR6076-201ENST00000617521 113 ntBASIC2.62□□□□□ -1.99
SMARCB1Q12824 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.62□□□□□ -1.99
SMARCB1Q12824 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMARCB1Q12824 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMARCB1Q12824 Y_RNA.192-201ENST00000363977 102 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 RNU6-413P-201ENST00000384115 107 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 ANAPC10P1-201ENST00000395991 556 ntBASIC2.61□□□□□ -1.99
SMARCB1Q12824 RSL24D1P4-201ENST00000400938 484 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms