Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK3Q00526 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
CDK3Q00526 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK3Q00526 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK3Q00526 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 RNU4-40P-201ENST00000364351 143 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 RNU4-91P-201ENST00000364778 135 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDK3Q00526 SNORA9-201ENST00000384215 133 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 SNORA36C-201ENST00000384289 132 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 MIR493-201ENST00000385254 89 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 HMGN1P14-201ENST00000412459 517 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AC063979.1-201ENST00000415539 377 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK3Q00526 TIMM9P1-201ENST00000436122 256 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 TXNP1-201ENST00000441872 371 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 ATP5C1P1-201ENST00000441945 895 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.27□□□□□ -1.89
CDK3Q00526 AC108059.3-201ENST00000456388 214 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 AL049874.1-201ENST00000489560 388 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK3Q00526 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 RNU6-1231P-201ENST00000517185 103 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 SNORA70.24-201ENST00000517233 118 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK3Q00526 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK3Q00526 MIR3921-201ENST00000577308 85 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 MIR5680-201ENST00000577577 84 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 MIR3146-201ENST00000580367 79 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 NBR2-204ENST00000587322 63 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AC022146.1-201ENST00000595307 847 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK3Q00526 AC012531.5-201ENST00000611375 151 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AC245517.5-201ENST00000611529 162 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AC093783.1-201ENST00000612976 329 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AL136313.1-201ENST00000624804 202 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 MIR3651-201ENST00000630427 90 ntBASIC3.27□□□□□ -1.89
CDK3Q00526 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK3Q00526 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK3Q00526 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK3Q00526 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDK3Q00526 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDK3Q00526 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CDK3Q00526 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CDK3Q00526 RNU1-70P-201ENST00000362618 164 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RNY4P16-201ENST00000364768 94 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 MIR491-201ENST00000384877 84 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 TXNP7-201ENST00000406296 293 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AP000567.1-201ENST00000406413 156 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL21P24-201ENST00000413752 448 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL30P2-201ENST00000414021 291 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 SPA17P1-201ENST00000416656 452 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL21P32-201ENST00000419877 477 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AC018630.2-202ENST00000422992 927 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK3Q00526 RPL27AP8-201ENST00000424277 446 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 UBE2D3P2-201ENST00000424409 445 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK3Q00526 RPL7L1P10-201ENST00000427790 463 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL23AP83-201ENST00000434984 473 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK3Q00526 MTCO3P45-201ENST00000443036 613 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK3Q00526 AL360221.1-201ENST00000445989 335 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 Z75741.1-201ENST00000446793 314 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK3Q00526 ST13P20-201ENST00000447996 1065 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK3Q00526 AC008481.1-201ENST00000463278 396 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AL049714.1-201ENST00000466686 347 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL31P60-201ENST00000478450 367 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL7P47-201ENST00000497299 556 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK3Q00526 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK3Q00526 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.26□□□□□ -1.89
CDK3Q00526 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK3Q00526 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK3Q00526 AP003467.2-201ENST00000520175 319 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK3Q00526 AC107934.1-201ENST00000522215 217 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AP003181.2-201ENST00000528941 181 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 RPL21P5-201ENST00000554662 472 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 TGIF1P1-201ENST00000558095 802 ntBASIC3.26□□□□□ -1.89
CDK3Q00526 AP005205.1-201ENST00000563503 508 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms