Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.62□□□□□ -1.99
PKNOX1P55347 BX664608.1-201ENST00000610519 487 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AL162274.2-201ENST00000614406 332 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AL603758.1-201ENST00000618654 241 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC002064.3-201ENST00000623448 346 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 OR4G3P-201ENST00000633500 913 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.62□□□□□ -1.99
PKNOX1P55347 MTCO1P9-201ENST00000505577 1534 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PKNOX1P55347 RNU6-97P-201ENST00000363387 104 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 RNU1-100P-201ENST00000365255 165 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 RNA5SP171-201ENST00000391071 115 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 UBA52P6-201ENST00000399822 382 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 RNA5SP21-201ENST00000410917 96 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX1P55347 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.61□□□□□ -1.99
PKNOX1P55347 AL645937.1-202ENST00000421799 937 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 NDUFB4P7-201ENST00000423198 363 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 HMGN2P30-201ENST00000423237 256 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX1P55347 FGF7P5-201ENST00000441829 291 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 SNRPGP6-201ENST00000451124 220 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX1P55347 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX1P55347 KC877373.1-201ENST00000479066 408 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC021382.1-201ENST00000483523 359 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 FAM172BP-201ENST00000487497 1089 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AL049874.1-201ENST00000489560 388 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 TTC39CP1-201ENST00000512513 755 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC090136.1-201ENST00000520009 240 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 HMGB1P41-201ENST00000520234 440 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.61□□□□□ -1.99
PKNOX1P55347 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX1P55347 NBEAP1-201ENST00000554452 979 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.61□□□□□ -1.99
PKNOX1P55347 MTND1P8-201ENST00000571424 950 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 MIR3944-201ENST00000581277 108 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 MTCO2P2-201ENST00000591258 225 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC004987.4-201ENST00000603383 338 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
PKNOX1P55347 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKNOX1P55347 AP000526.1-201ENST00000603308 1388 ntBASIC2.61□□□□□ -1.99
PKNOX1P55347 AC005832.2-201ENST00000538921 1430 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC138915.1-201ENST00000565427 1685 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC092447.10-201ENST00000620607 1652 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX1P55347 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX1P55347 OR4G2P-202ENST00000641004 1759 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 RNU6-744P-201ENST00000365557 107 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 RNU6-1316P-201ENST00000384242 108 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 MIR514A1-201ENST00000385133 98 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
PKNOX1P55347 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX1P55347 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.6□□□□□ -1.99
PKNOX1P55347 AC013410.2-201ENST00000422627 201 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 TXNL1P1-201ENST00000429528 554 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 TAAR7P-201ENST00000436141 242 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX1P55347 RSL24D1P3-201ENST00000449255 495 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 RPL7P18-201ENST00000478965 734 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.6□□□□□ -1.99
PKNOX1P55347 HIGD1AP13-201ENST00000509878 289 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC024589.1-201ENST00000512207 263 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX1P55347 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX1P55347 SCARNA1-201ENST00000517138 166 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC007954.1-201ENST00000554198 494 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.6□□□□□ -1.99
PKNOX1P55347 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.6□□□□□ -1.99
PKNOX1P55347 AC245884.10-201ENST00000597355 337 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC090186.1-201ENST00000605991 572 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC093732.2-201ENST00000607950 274 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 AC024933.1-201ENST00000608472 348 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 MIR6798-201ENST00000612887 67 ntBASIC2.6□□□□□ -1.99
PKNOX1P55347 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.6□□□□□ -1.99
PKNOX1P55347 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX1P55347 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PKNOX1P55347 RNU6-270P-201ENST00000364131 105 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 RNU6-1078P-201ENST00000364522 103 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 SNORA18.3-201ENST00000384122 132 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 RNU6-114P-201ENST00000384704 105 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AL356421.1-201ENST00000403255 413 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 RN7SKP27-201ENST00000410684 333 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AL096701.2-201ENST00000416920 238 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AL389915.1-201ENST00000422463 466 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC018630.2-202ENST00000422992 927 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC084290.1-201ENST00000434995 374 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.59□□□□□ -1.99
PKNOX1P55347 SNRPEP7-201ENST00000438350 220 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 LSM1P1-201ENST00000438629 273 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms