Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AL133153.1-201ENST00000557756 303 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 MIR3616-201ENST00000584070 92 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 MIR3922-201ENST00000585192 84 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 RNU6-88P-201ENST00000606801 100 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC135507.1-201ENST00000607214 561 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC004908.2-201ENST00000609090 574 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AC068057.2-201ENST00000624047 895 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMKR1H3BMG3 MTND5P33-201ENST00000571250 1450 ntBASIC2.14□□□□□ -2.07
SMKR1H3BMG3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 RPL7P25-201ENST00000404151 721 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AL359704.1-201ENST00000411586 781 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 RPL17P12-201ENST00000413391 526 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC096649.2-201ENST00000416186 393 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 SYF2P2-201ENST00000417620 583 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 BPY2DP-201ENST00000422208 265 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 MTCO2P20-201ENST00000437339 673 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 RSU1P2-202ENST00000437884 485 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC010631.1-201ENST00000474150 156 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 RN7SL297P-201ENST00000483161 293 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 PAICSP4-201ENST00000517543 1253 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AP000857.1-201ENST00000532151 543 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 MTCO3P13-201ENST00000577757 781 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 UBL5P2-201ENST00000583788 219 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC067959.1-201ENST00000604334 379 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AL592221.1-201ENST00000605266 382 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC004805.2-201ENST00000605382 482 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC080013.3-201ENST00000606839 578 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AL157392.4-201ENST00000609756 345 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AC112204.3-201ENST00000623822 332 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 LRRC77P-213ENST00000637727 880 ntBASIC2.13□□□□□ -2.07
SMKR1H3BMG3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.13□□□□□ -2.07
SMKR1H3BMG3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RNU6-443P-201ENST00000384780 107 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AL357075.1-201ENST00000404107 726 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RPL7P8-201ENST00000411964 730 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AL096701.2-201ENST00000416920 238 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RSL24D1P6-201ENST00000426934 401 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC005300.1-201ENST00000428401 373 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 C4BPAP2-201ENST00000428434 478 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC244035.1-201ENST00000430042 390 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 MED14P1-201ENST00000430517 648 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 MTND1P28-201ENST00000435623 950 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 OSTCP8-201ENST00000445117 448 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 ELOCP30-201ENST00000447108 299 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC233279.1-201ENST00000455300 423 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RPL21P10-201ENST00000463521 490 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC098591.2-201ENST00000510152 315 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC022447.1-201ENST00000515358 464 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC007458.1-201ENST00000542812 373 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC007115.1-201ENST00000546853 234 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC123904.3-201ENST00000547218 814 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC093012.1-202ENST00000549403 582 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms