Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNU6-329P-201ENST00000459618 107 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 PARP4P3-201ENST00000510265 317 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU4-49P-201ENST00000516080 140 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 SNORA14.1-201ENST00000516113 141 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU7-30P-201ENST00000516835 62 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC069113.1-201ENST00000517763 267 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC090136.1-201ENST00000520009 240 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 MT1CP-201ENST00000567054 174 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR5010-201ENST00000582846 120 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 DUSP12P1-201ENST00000612874 516 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR6076-201ENST00000617521 113 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AC104966.1-201ENST00000467010 1464 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 COX6B1P3-201ENST00000312310 260 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 HSPE1P1-201ENST00000421494 318 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AC115283.1-201ENST00000427353 400 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 SNORA71B-202ENST00000439232 272 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 HMGN2P7-201ENST00000456186 273 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 RPL21P13-201ENST00000488305 481 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AP002812.1-201ENST00000495378 474 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 MTND3P22-201ENST00000510932 243 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 SNORA19.2-201ENST00000516013 114 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR744-201ENST00000578242 98 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 BNIP3P25-201ENST00000596023 559 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 uc_338.32-201ENST00000615087 172 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 AC002076.2-201ENST00000617362 122 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GTF3C3Q9Y5Q9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 RN7SKP103-201ENST00000363848 320 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU6-217P-201ENST00000384164 104 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR578-201ENST00000384828 96 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 RPS4XP3-201ENST00000398541 413 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 HSPE1P12-201ENST00000412576 301 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AC108075.1-201ENST00000424692 529 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 RPS17P8-201ENST00000434525 335 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 RPS11P7-201ENST00000442125 465 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AC025554.1-201ENST00000505641 188 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 HMGB3P15-201ENST00000507326 574 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AP006289.1-201ENST00000538089 277 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR4502-201ENST00000580432 81 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL589674.2-201ENST00000604304 337 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 ATP1B3P1-201ENST00000605365 821 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 FTX_3.1-201ENST00000610451 147 ntBASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
GTF3C3Q9Y5Q9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.15□□□□□ -1.43
GTF3C3Q9Y5Q9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
GTF3C3Q9Y5Q9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC6.15□□□□□ -1.43
GTF3C3Q9Y5Q9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
GTF3C3Q9Y5Q9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.15□□□□□ -1.43
GTF3C3Q9Y5Q9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AF127577.6-201ENST00000623352 2191 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 RN7SKP160-201ENST00000363804 340 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 RNA5SP234-201ENST00000363916 119 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 SNORD81.2-201ENST00000365153 76 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL031985.1-201ENST00000392713 418 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 AL353621.1-201ENST00000418219 243 ntBASIC6.14□□□□□ -1.43
GTF3C3Q9Y5Q9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms