Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL139413.1-201ENST00000421309 217 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC093156.1-201ENST00000440382 670 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 MTND3P10-201ENST00000450967 341 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 snoU109.4-201ENST00000458953 143 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 ST13P14-201ENST00000474095 734 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC069499.1-201ENST00000489433 509 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 Y_RNA.704-201ENST00000516851 102 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AP003072.2-201ENST00000527756 676 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 KC877982.1-201ENST00000602313 470 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC011451.2-201ENST00000604303 598 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AL034351.1-201ENST00000605288 668 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AP001330.5-201ENST00000607176 411 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC008536.2-201ENST00000607284 349 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC025253.1-201ENST00000613623 543 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 DUXAP9-208ENST00000622815 614 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSX2IPQ9Y2D8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSX2IPQ9Y2D8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSX2IPQ9Y2D8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.89-201ENST00000363031 102 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 RNY4P16-201ENST00000364768 94 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.295-201ENST00000364918 102 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.303-201ENST00000364998 94 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 U1.1-201ENST00000384101 164 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 SNORA5A-201ENST00000384111 134 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-761P-201ENST00000384148 107 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 SNORA70E-201ENST00000384492 135 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-456P-201ENST00000384493 107 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 RPL21P17-201ENST00000397467 475 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 HMGN1P24-201ENST00000412282 298 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 RPS15AP12-201ENST00000419498 388 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 ELOCP4-201ENST00000420090 333 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AL109913.1-201ENST00000421173 514 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC011742.1-201ENST00000431448 434 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AL133162.1-201ENST00000463228 453 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC008549.1-201ENST00000512900 643 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 MTND1P35-201ENST00000526739 508 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC087499.8-201ENST00000578406 226 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 MIR5187-201ENST00000583479 76 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC008752.3-201ENST00000588113 712 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 LLPHP1-201ENST00000603571 367 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC006329.2-201ENST00000611491 394 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC002550.2-201ENST00000621246 394 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC040168.1-201ENST00000623594 991 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC009161.2-201ENST00000624626 138 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AL159972.1-201ENST00000625150 448 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC244205.2-202ENST00000635781 342 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 AC009093.8-201ENST00000641769 292 ntBASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX2IPQ9Y2D8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-1097P-201ENST00000363586 107 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.159-201ENST00000363674 87 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-1322P-201ENST00000364309 107 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-534P-201ENST00000364877 106 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-877P-201ENST00000383868 107 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-483P-201ENST00000384088 108 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 MIR124-3-201ENST00000384866 87 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 MIR153-1-201ENST00000384914 90 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RPL7P60-201ENST00000397636 735 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 Z98941.1-201ENST00000407764 100 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 RNU2-62P-201ENST00000410868 191 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 MTATP6P18-201ENST00000417994 673 ntBASIC4.14□□□□□ -1.75
SSX2IPQ9Y2D8 TIMM9P1-201ENST00000436122 256 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms