Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC244035.1-201ENST00000430042 390 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AL365184.2-201ENST00000431139 435 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 TIMM9P1-201ENST00000436122 256 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 UBE2D3P1-201ENST00000436669 444 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AL512286.1-201ENST00000439244 400 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 RN7SL283P-201ENST00000489055 303 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 MRPS33P3-201ENST00000513456 322 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 MIR4293-201ENST00000584305 78 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 KC877982.1-201ENST00000602313 470 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 Z99289.3-201ENST00000605586 594 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC239868.4-201ENST00000608318 671 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AL161629.2-201ENST00000615347 275 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC008669.1-201ENST00000565823 2178 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AP000568.1-201ENST00000282964 442 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 RNA5SP515-201ENST00000364570 118 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 RPS20P2-201ENST00000402520 389 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC099548.1-201ENST00000421443 426 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC069157.1-201ENST00000421749 137 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AL353705.1-201ENST00000433468 480 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AL714022.1-201ENST00000439897 151 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC087588.1-201ENST00000462203 316 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 RN7SL385P-201ENST00000468873 276 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC116337.2-201ENST00000477662 156 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC068587.2-201ENST00000478386 781 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AL160314.1-201ENST00000490836 438 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC093663.1-201ENST00000497190 394 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 RN7SKP258-201ENST00000517151 304 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC005951.1-201ENST00000576706 485 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC026790.2-201ENST00000606282 430 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC004852.3-201ENST00000614131 326 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC009159.1-201ENST00000618386 642 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 AC093591.3-201ENST00000634516 308 ntBASIC3.21□□□□□ -1.9
VPS33AQ96AX1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS33AQ96AX1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 RNU6-809P-201ENST00000384461 107 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 SNORD115.1-201ENST00000391109 76 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC107081.1-201ENST00000414975 361 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 Z99497.1-201ENST00000421282 135 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC016696.1-201ENST00000446949 318 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 RNU7-23P-201ENST00000459465 62 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC112204.1-201ENST00000502591 103 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 RNU6-232P-201ENST00000517144 64 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 MTND4LP18-201ENST00000526864 291 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC005476.1-201ENST00000554427 397 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC068135.2-201ENST00000569293 1028 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC006504.3-201ENST00000586818 523 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC019176.2-201ENST00000611579 315 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC068724.3-201ENST00000625906 87 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 ZNF833P-201ENST00000424938 1494 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
VPS33AQ96AX1 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
VPS33AQ96AX1 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms