Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNORA62.6-201ENST00000606322 83 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC006329.2-201ENST00000611491 394 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC025253.1-201ENST00000613623 543 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AL159972.1-201ENST00000625150 448 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 CASC19-280ENST00000642102 1351 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 MTND5P3-201ENST00000438536 1800 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 Y_RNA.70-201ENST00000362886 110 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 SNORA62-201ENST00000365493 153 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 MT-TL1-201ENST00000386347 75 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 MTATP6P18-201ENST00000417994 673 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 RPL31P12-201ENST00000422587 358 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 ZNF863P-201ENST00000426746 417 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 MRPS18BP2-201ENST00000434310 759 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 RPL7P54-201ENST00000438336 674 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC117522.1-201ENST00000509821 380 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 RNU6-358P-201ENST00000516564 75 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 Y_RNA.702-201ENST00000516843 96 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 RNA5SP337-201ENST00000517007 109 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC104383.1-201ENST00000530297 370 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 OR4P1P-201ENST00000530808 1136 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 BNIP3P33-201ENST00000598912 569 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 KC877982.1-201ENST00000602313 470 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL606490.9-201ENST00000603331 271 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL049634.3-201ENST00000604968 457 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL136363.1-201ENST00000605349 337 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AP001330.5-201ENST00000607176 411 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AL020991.1-201ENST00000612314 373 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 MIR6810-201ENST00000622701 70 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 AC040168.1-201ENST00000623594 991 ntBASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP4Q8N3C7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 RNU6-1322P-201ENST00000364309 107 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 RNA5SP283-201ENST00000365604 119 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 SOD2P1-201ENST00000396543 562 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 RPL7P60-201ENST00000397636 735 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 TIMM9P1-201ENST00000436122 256 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 RAC1P7-201ENST00000445367 377 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 SNORD121B-201ENST00000458838 81 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 RN7SKP209-201ENST00000516888 304 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 SCARNA14-201ENST00000516903 136 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC005730.3-201ENST00000583067 366 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AL355812.1-201ENST00000603215 216 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 Z84480.1-201ENST00000605131 311 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC093788.1-201ENST00000609356 927 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AL356585.4-201ENST00000623078 1229 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 AC009161.2-201ENST00000624626 138 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 RNA5SP196-201ENST00000625967 102 ntBASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP4Q8N3C7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLIP4Q8N3C7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLIP4Q8N3C7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms