Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL035405.1-201ENST00000400795 710 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 RPPH1-2P-201ENST00000516688 293 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC087373.1-201ENST00000524920 491 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC011477.1-204ENST00000623416 1325 ntBASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VPS13DQ5THJ4 AC073264.1-201ENST00000411508 416 ntBASIC0.9□□□□□ -2.26
VPS13DQ5THJ4 snoU13.3-201ENST00000459441 104 ntBASIC0.9□□□□□ -2.26
VPS13DQ5THJ4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC0.9□□□□□ -2.26
VPS13DQ5THJ4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
VPS13DQ5THJ4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.9□□□□□ -2.26
VPS13DQ5THJ4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.9□□□□□ -2.26
VPS13DQ5THJ4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC239798.3-201ENST00000454459 408 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC114801.2-201ENST00000503825 781 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC097504.2-201ENST00000608088 454 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC091932.3-201ENST00000624223 323 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC135999.1-201ENST00000478962 479 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 AC008885.2-201ENST00000509506 930 ntBASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS13DQ5THJ4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AL030996.1-201ENST00000411430 235 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 MTCYBP12-201ENST00000440559 1134 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 SNORD121B-201ENST00000458838 81 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC093767.1-201ENST00000504523 156 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 RNU6-405P-201ENST00000516637 110 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 RNU6-467P-201ENST00000517027 110 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AL137100.2-201ENST00000555786 315 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 PGBD4P3-201ENST00000440731 581 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC096571.1-202ENST00000506634 735 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC023825.1-201ENST00000566704 1030 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 MIR4512-201ENST00000583257 77 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 ZNF734P-201ENST00000419494 1534 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 MTND4LP16-201ENST00000440828 295 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 U8.1-201ENST00000362843 134 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC090096.1-201ENST00000489168 390 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC109471.1-201ENST00000511631 612 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 NOP56P3-201ENST00000549457 385 ntBASIC0.89□□□□□ -2.27
VPS13DQ5THJ4 CENPCP1-201ENST00000533085 2578 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AL139109.1-201ENST00000455491 297 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 ATG12P2-201ENST00000456830 416 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 MRPL42P6-201ENST00000486397 371 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 RPS3AP22-201ENST00000488297 769 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 RNU6-1334P-201ENST00000516032 105 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 Y_RNA.675-201ENST00000516389 149 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 FAM106DP-201ENST00000586416 501 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC011330.2-201ENST00000621680 635 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 OR1L1-202ENST00000373686 1083 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 Z96811.1-201ENST00000445880 108 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 COX6CP14-201ENST00000469580 174 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC022493.1-201ENST00000492984 337 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 SEM1P1-201ENST00000506694 209 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AL445493.3-201ENST00000619568 477 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 SNORA51.12-201ENST00000384448 134 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC017099.1-201ENST00000448261 1028 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC005297.2-201ENST00000450430 606 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 AC021382.1-201ENST00000483523 359 ntBASIC0.88□□□□□ -2.27
VPS13DQ5THJ4 RNA5SP476-201ENST00000516613 103 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms