Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DOBP13765 MIR1277-201ENST00000408536 78 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 RNU2-43P-201ENST00000410306 190 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 SNORA57.3-201ENST00000411095 141 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 MTCO3P12-201ENST00000416718 547 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 MTATP6P18-201ENST00000417994 673 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC245054.1-201ENST00000420944 258 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 MTND1P2-201ENST00000430604 821 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC016696.1-201ENST00000446949 318 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC140076.1-201ENST00000449897 361 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC068305.1-201ENST00000497406 726 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC105914.1-201ENST00000511798 226 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 Y_RNA.693-201ENST00000516641 110 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 RNU6-410P-201ENST00000517006 107 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC134698.4-201ENST00000523451 826 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 CBX3P5-201ENST00000552017 521 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AL359212.1-201ENST00000556608 614 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC234778.2-201ENST00000566241 354 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC006504.3-201ENST00000586818 523 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 XIAPP1-201ENST00000603162 600 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC110741.2-201ENST00000605278 268 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AL136363.1-201ENST00000605349 337 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC103710.2-201ENST00000609912 942 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC244100.1-202ENST00000621554 382 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC139792.3-201ENST00000623525 224 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC005609.4-201ENST00000625071 447 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 MIR4275-201ENST00000636486 87 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC119674.1-207ENST00000641355 633 ntBASIC3.26□□□□□ -1.89
HLA-DOBP13765 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DOBP13765 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DOBP13765 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DOBP13765 AC138915.3-201ENST00000562908 1389 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 HSPE1P11-201ENST00000339579 310 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 Y_RNA.159-201ENST00000363674 87 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 RNU6-335P-201ENST00000364563 113 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 RNU1-39P-201ENST00000383897 165 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 MTND4LP11-201ENST00000422184 280 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC005094.1-201ENST00000440420 368 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AL662791.1-201ENST00000441992 928 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 S100A11P1-201ENST00000477525 312 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 RNU2-10P-201ENST00000516375 211 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 RNU6-64P-201ENST00000517119 105 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 RNU6-1220P-201ENST00000517126 108 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AP004371.1-201ENST00000525240 214 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC007424.1-203ENST00000554613 687 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AL512360.1-201ENST00000555346 234 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AL034351.1-201ENST00000605288 668 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AC007390.2-201ENST00000606229 3803 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 AP001330.5-201ENST00000607176 411 ntBASIC3.25□□□□□ -1.89
HLA-DOBP13765 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DOBP13765 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DOBP13765 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms