Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Actl10-202ENSMUST00000226583 1501 ntBASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb3S4R1G7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb3S4R1G7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.65□□□□□ -0.07
H2afb3S4R1G7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Gm13186-201ENSMUST00000118031 316 ntBASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H2afb3S4R1G7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H2afb3S4R1G7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms