Protein–RNA interactions for Protein: Q9Z2D8

Mbd3, Methyl-CpG-binding domain protein 3, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3Q9Z2D8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mbd3Q9Z2D8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Prob1-201ENSMUST00000097619 3021 ntBASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3Q9Z2D8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3Q9Z2D8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Asic1-205ENSMUST00000228185 1818 ntBASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Gm13474-201ENSMUST00000122466 815 ntBASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3Q9Z2D8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3Q9Z2D8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3Q9Z2D8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms