Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Gm25016-201ENSMUST00000158399 131 ntBASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Gm6659-201ENSMUST00000174752 547 ntBASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20bQ9Z104 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Gm23634-201ENSMUST00000175071 91 ntBASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Gm6345-202ENSMUST00000180900 204 ntBASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20bQ9Z104 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20bQ9Z104 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Gm11950-201ENSMUST00000121615 838 ntBASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20bQ9Z104 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20bQ9Z104 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms