Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm23935-201ENSMUST00000102303 57 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm24270-201ENSMUST00000102326 57 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm15920-201ENSMUST00000118998 402 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm24245-201ENSMUST00000157318 57 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Mir8112-201ENSMUST00000184382 131 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44357-201ENSMUST00000195897 142 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm19658-201ENSMUST00000196231 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44367-201ENSMUST00000196836 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44350-201ENSMUST00000197197 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44390-201ENSMUST00000197533 144 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44313-201ENSMUST00000198018 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44486-201ENSMUST00000198508 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44314-201ENSMUST00000199263 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44394-201ENSMUST00000199558 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44484-201ENSMUST00000199873 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44466-201ENSMUST00000200264 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm44359-201ENSMUST00000200671 138 ntBASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Gm10576-201ENSMUST00000191927 825 ntBASIC14.24□□□□□ -0.13
Nubp1Q9R060 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nubp1Q9R060 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nubp1Q9R060 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Gm7230-201ENSMUST00000173026 815 ntBASIC14.23□□□□□ -0.13
Nubp1Q9R060 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.23□□□□□ -0.13
Nubp1Q9R060 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms