Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.08■□□□□ 0.16
Tdp2Q9JJX7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tdp2Q9JJX7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tdp2Q9JJX7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Gm18115-201ENSMUST00000221209 621 ntBASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tdp2Q9JJX7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tdp2Q9JJX7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tdp2Q9JJX7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tdp2Q9JJX7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms