Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm8825-201ENSMUST00000182565 998 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm4518-201ENSMUST00000182638 718 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Mir8117-201ENSMUST00000184773 107 ntBASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn5aQ9JJV9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Scn5aQ9JJV9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn5aQ9JJV9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Scn5aQ9JJV9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms