Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Gm44492-201ENSMUST00000197012 141 ntBASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Gm20949-201ENSMUST00000206478 952 ntBASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-4Q9EQM3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Gm4899-201ENSMUST00000178708 719 ntBASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-4Q9EQM3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-4Q9EQM3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Mir1895-201ENSMUST00000122615 79 ntBASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm27494-201ENSMUST00000184735 189 ntBASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm43438-201ENSMUST00000198133 379 ntBASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-4Q9EQM3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms