Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssmem1Q9D9Y8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Gm13216-201ENSMUST00000117145 591 ntBASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Gm36967-201ENSMUST00000193814 266 ntBASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssmem1Q9D9Y8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssmem1Q9D9Y8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Gm13312-201ENSMUST00000119631 718 ntBASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssmem1Q9D9Y8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Rprl3-201ENSMUST00000157400 290 ntBASIC14.03□□□□□ -0.16
Ssmem1Q9D9Y8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms