Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm27867-201ENSMUST00000184778 125 ntBASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm44454-201ENSMUST00000198541 138 ntBASIC21.39■■□□□ 1.01
U2af1Q9D883 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.39■■□□□ 1.01
U2af1Q9D883 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.39■■□□□ 1.01
U2af1Q9D883 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2af1Q9D883 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2af1Q9D883 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
U2af1Q9D883 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2af1Q9D883 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
U2af1Q9D883 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2af1Q9D883 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Gm7153-201ENSMUST00000117092 455 ntBASIC21.38■■□□□ 1.01
U2af1Q9D883 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.38■■□□□ 1.01
U2af1Q9D883 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.38■■□□□ 1.01
U2af1Q9D883 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.38■■□□□ 1.01
U2af1Q9D883 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.38■■□□□ 1.01
U2af1Q9D883 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2af1Q9D883 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.38■■□□□ 1.01
U2af1Q9D883 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
U2af1Q9D883 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
U2af1Q9D883 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC21.37■■□□□ 1.01
U2af1Q9D883 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
U2af1Q9D883 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2af1Q9D883 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
U2af1Q9D883 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
U2af1Q9D883 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
U2af1Q9D883 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2af1Q9D883 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
U2af1Q9D883 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
U2af1Q9D883 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
U2af1Q9D883 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Gm15165-201ENSMUST00000118140 502 ntBASIC21.35■■□□□ 1.01
U2af1Q9D883 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Birc2-201ENSMUST00000054878 378 ntBASIC21.35■■□□□ 1.01
U2af1Q9D883 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
U2af1Q9D883 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2af1Q9D883 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2af1Q9D883 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms