Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gm21362-201ENSMUST00000194272 928 ntBASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Gm7367-201ENSMUST00000057611 492 ntBASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem54Q9D7S1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.25□□□□□ -0.13
Tmem54Q9D7S1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem54Q9D7S1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.23□□□□□ -0.13
Tmem54Q9D7S1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms