Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snrnp48Q9D361 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snrnp48Q9D361 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Snrnp48Q9D361 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Snrnp48Q9D361 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Snrnp48Q9D361 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Snrnp48Q9D361 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Snrnp48Q9D361 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.27■□□□□ 0.19
Snrnp48Q9D361 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Gm6623-201ENSMUST00000173570 544 ntBASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Gm44430-201ENSMUST00000203376 995 ntBASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Snrnp48Q9D361 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Gm11950-201ENSMUST00000121615 838 ntBASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Gm10052-201ENSMUST00000168019 960 ntBASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Gm7729-201ENSMUST00000050143 801 ntBASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Snrnp48Q9D361 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Gm45328-201ENSMUST00000210942 917 ntBASIC16.24■□□□□ 0.19
Snrnp48Q9D361 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Snrnp48Q9D361 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms