Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Gm22240-201ENSMUST00000175225 82 ntBASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
Snf8Q9CZ28 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.78■□□□□ 0.28
Snf8Q9CZ28 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Prob1-201ENSMUST00000097619 3021 ntBASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Snf8Q9CZ28 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.77■□□□□ 0.28
Snf8Q9CZ28 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Snf8Q9CZ28 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Snf8Q9CZ28 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Phf7-203ENSMUST00000226565 1971 ntBASIC16.76■□□□□ 0.27
Snf8Q9CZ28 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Snf8Q9CZ28 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Snf8Q9CZ28 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.75■□□□□ 0.27
Snf8Q9CZ28 Odf3b-204ENSMUST00000227834 930 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms