Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nip7Q9CXK8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Mir6404-201ENSMUST00000183699 94 ntBASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Gm2756-201ENSMUST00000195851 400 ntBASIC20.22■□□□□ 0.83
Nip7Q9CXK8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nip7Q9CXK8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Gm23935-201ENSMUST00000102303 57 ntBASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Gm24270-201ENSMUST00000102326 57 ntBASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Gm24245-201ENSMUST00000157318 57 ntBASIC20.21■□□□□ 0.83
Nip7Q9CXK8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.21■□□□□ 0.83
Nip7Q9CXK8 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nip7Q9CXK8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Nip7Q9CXK8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Nip7Q9CXK8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Gm27397-201ENSMUST00000184997 107 ntBASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Gm18622-201ENSMUST00000219361 595 ntBASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nip7Q9CXK8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms