Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpusd4Q9CWX4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Gm2274-201ENSMUST00000184539 609 ntBASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Gm9987-201ENSMUST00000069768 567 ntBASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpusd4Q9CWX4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpusd4Q9CWX4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpusd4Q9CWX4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms