Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Gm18889-201ENSMUST00000174284 929 ntBASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdh23Q99PF4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Mir449b-201ENSMUST00000104833 80 ntBASIC16.51■□□□□ 0.23
Cdh23Q99PF4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Gm22175-201ENSMUST00000175007 78 ntBASIC16.51■□□□□ 0.23
Cdh23Q99PF4 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.51■□□□□ 0.23
Cdh23Q99PF4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Gm27301-201ENSMUST00000184012 127 ntBASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdh23Q99PF4 Gm15427-201ENSMUST00000117288 531 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Gm7653-201ENSMUST00000214567 508 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Gm13823-201ENSMUST00000119930 345 ntBASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdh23Q99PF4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Gm17271-201ENSMUST00000165535 355 ntBASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.48■□□□□ 0.23
Cdh23Q99PF4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdh23Q99PF4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Gm45167-201ENSMUST00000208007 322 ntBASIC16.47■□□□□ 0.23
Cdh23Q99PF4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms