Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tpgs1Q99MS8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tpgs1Q99MS8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tpgs1Q99MS8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tpgs1Q99MS8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Tpgs1Q99MS8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Tpgs1Q99MS8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpgs1Q99MS8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpgs1Q99MS8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpgs1Q99MS8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpgs1Q99MS8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpgs1Q99MS8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms