Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Gm17971-201ENSMUST00000190239 806 ntBASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tlr3Q99MB1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Gm17807-201ENSMUST00000186869 298 ntBASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tlr3Q99MB1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Gm29518-201ENSMUST00000190858 372 ntBASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tlr3Q99MB1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tlr3Q99MB1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tlr3Q99MB1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Gm6623-201ENSMUST00000173570 544 ntBASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tlr3Q99MB1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tlr3Q99MB1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms