Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cdk5rap3Q99LM2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cdk5rap3Q99LM2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.89■□□□□ 0.3
Cdk5rap3Q99LM2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdk5rap3Q99LM2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Gm22240-201ENSMUST00000175225 82 ntBASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk5rap3Q99LM2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdk5rap3Q99LM2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdk5rap3Q99LM2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
Cdk5rap3Q99LM2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk5rap3Q99LM2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms