Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Gm13036-201ENSMUST00000117799 748 ntBASIC16.24■□□□□ 0.19
Cstf1Q99LC2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.24■□□□□ 0.19
Cstf1Q99LC2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cstf1Q99LC2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.23■□□□□ 0.19
Cstf1Q99LC2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cstf1Q99LC2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cstf1Q99LC2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms