Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Gm13168-201ENSMUST00000121771 632 ntBASIC16.46■□□□□ 0.23
Cdk9Q99J95 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Gm22240-201ENSMUST00000175225 82 ntBASIC16.46■□□□□ 0.23
Cdk9Q99J95 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Cdk9Q99J95 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdk9Q99J95 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Cdk9Q99J95 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Gm18025-201ENSMUST00000221733 862 ntBASIC16.45■□□□□ 0.22
Cdk9Q99J95 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.45■□□□□ 0.22
Cdk9Q99J95 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk9Q99J95 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk9Q99J95 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.43■□□□□ 0.22
Cdk9Q99J95 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Gm13158-201ENSMUST00000122007 736 ntBASIC16.43■□□□□ 0.22
Cdk9Q99J95 Gm42545-201ENSMUST00000202755 922 ntBASIC16.43■□□□□ 0.22
Cdk9Q99J95 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdk9Q99J95 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Gm24841-201ENSMUST00000158676 357 ntBASIC16.42■□□□□ 0.22
Cdk9Q99J95 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdk9Q99J95 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdk9Q99J95 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms