Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Gm20049-201ENSMUST00000219950 730 ntBASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Asic1-205ENSMUST00000228185 1818 ntBASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Prob1-201ENSMUST00000097619 3021 ntBASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Gm15378-201ENSMUST00000121894 207 ntBASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thumpd1Q99J36 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Gm12085-201ENSMUST00000119263 940 ntBASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thumpd1Q99J36 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thumpd1Q99J36 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.52□□□□□ -0.09
Thumpd1Q99J36 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thumpd1Q99J36 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms