Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Gm17971-201ENSMUST00000190239 806 ntBASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Gm36967-201ENSMUST00000193814 266 ntBASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha11Q91Y19 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha11Q91Y19 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Gm13216-201ENSMUST00000117145 591 ntBASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Gm12895-201ENSMUST00000122214 226 ntBASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha11Q91Y19 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha11Q91Y19 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha11Q91Y19 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha11Q91Y19 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha11Q91Y19 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms