Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha9Q91Y11 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha9Q91Y11 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Gm14859-201ENSMUST00000117752 357 ntBASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha9Q91Y11 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha9Q91Y11 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Gm13312-201ENSMUST00000119631 718 ntBASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha9Q91Y11 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms