Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb15Q91Y04 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb15Q91Y04 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Gm36967-201ENSMUST00000193814 266 ntBASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb15Q91Y04 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Gm5417-201ENSMUST00000079706 384 ntBASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb15Q91Y04 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.27■□□□□ 0.52
Pcdhb15Q91Y04 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms