Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb3Q91XZ7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Gm37055-201ENSMUST00000191866 133 ntBASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Gm18025-201ENSMUST00000221733 862 ntBASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb3Q91XZ7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Gm11643-201ENSMUST00000119578 864 ntBASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb3Q91XZ7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Gm12382-201ENSMUST00000122005 922 ntBASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb3Q91XZ7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb3Q91XZ7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb3Q91XZ7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms