Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb5Q91XZ5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb5Q91XZ5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb5Q91XZ5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Gm6550-201ENSMUST00000187574 993 ntBASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Psmb5-202ENSMUST00000227257 622 ntBASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb5Q91XZ5 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 AV026068-213ENSMUST00000223675 1171 ntBASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb5Q91XZ5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Gm11594-201ENSMUST00000122313 162 ntBASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.12■□□□□ 0.65
Pcdhb5Q91XZ5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb5Q91XZ5 Mir6404-201ENSMUST00000183699 94 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms