Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga9Q91XX9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Mir3081-201ENSMUST00000175305 84 ntBASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga9Q91XX9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Gm27742-201ENSMUST00000184667 60 ntBASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Gm45328-201ENSMUST00000210942 917 ntBASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga9Q91XX9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga9Q91XX9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga9Q91XX9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga9Q91XX9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga9Q91XX9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga9Q91XX9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Gm36967-201ENSMUST00000193814 266 ntBASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga9Q91XX9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Gm27357-201ENSMUST00000183754 135 ntBASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms